- Artemis Software - Available from the Sanger Institute of the Wellcome Foundation, is a free genome viewer and annotation tool that allows visualization of sequence features and the results of analyses.
- DNA Baser - Commercial sequence package for contig assembly, normal and batch mode, to investigate genomic fragments, rRNA and protein genes. Includes trial download for Microsoft platforms from Windows 95 to Vista.
- DNA-Match - Program from BJ Diagnostik that reads and processes fragment analysis files measured on ABI DNA-sequencers.
- QualTrace Sequencing Software - Analyzes the raw data contained within ABI trace files to identify nine major problems with either the reactions or instrument.
- Technelysium Pty Ltd - Software to process files from ABI and Amersham MegaBace and other DNA sequencers. Reverse and complement sequence, export of text and clip images. Earlier version by free download.
- YASS - Offers downloadable program to perform local alignment of DNA sequences.
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